Healthy Greek Yogurt Banana Muffins: Your Go-To Recipe for Overripe Bananas
Transform those forgotten, overripe bananas on your counter into a delightful, protein-packed breakfast or snack. These healthy Greek yogurt banana muffins with chocolate chips are moist, flavorful, and incredibly easy to make, offering a nutritious alternative to traditional baked goods. Say goodbye to food waste and hello to a batch of wholesome, homemade goodness!

Don’t Throw Away Those Overripe Bananas!
The next time you spot a couple of lonely, browning bananas on your kitchen counter, resist the urge to toss them. Instead, consider it a stroke of culinary luck! These dark, spotty bananas are not past their prime; they’re at their peak for baking. Their concentrated sweetness and tender texture are precisely what make them perfect for this easy recipe for banana muffins with Greek yogurt.
The riper the bananas, the more natural sweetness they impart, reducing the need for added sugars in your muffins. This makes them not only delicious but also a healthier option. I often find myself intentionally letting bananas ripen just so I can whip up a batch of these wholesome treats. Sometimes, I even prepare the dry ingredients in advance, knowing that this versatile muffin base can also be used for zucchini yogurt muffins or pumpkin yogurt muffins, giving me delicious options for any craving!
Why You’ll Love These Healthy Banana Muffins
- Nutritious & Wholesome: Made with whole wheat flour and protein-rich Greek yogurt, these muffins offer a healthier alternative to typical sugary treats.
- Protein-Packed: Greek yogurt significantly boosts the protein content, helping you feel fuller for longer.
- Naturally Sweetened: Overripe bananas provide ample sweetness, allowing for less added sugar.
- Incredibly Moist: The Greek yogurt contributes to an unbelievably moist and tender crumb.
- Easy to Make: A straightforward recipe perfect for bakers of all skill levels.
- Kid & Toddler Approved: A delicious way to get more fruit and whole grains into your little ones’ diets.
- Perfect for Meal Prep: They store well on the counter or in the freezer, making them ideal for grab-and-go breakfasts or snacks throughout the week.
Essential Ingredient Notes for Perfect Muffins
Crafting the perfect batch of healthy banana yogurt muffins starts with understanding your ingredients. Here’s a closer look at what you’ll need and why specific choices matter:

- Ripe Bananas: These are the true heroes of our recipe. As bananas ripen, their starches convert to sugars, making them naturally sweeter and easier to mash. Look for bananas with plenty of brown spots or even entirely brown peels. This ensures maximum sweetness and moisture, reducing the need for additional sugar. If your bananas aren’t quite ripe enough, you can speed up the process by baking them unpeeled on a baking sheet at 300°F (150°C) for 15-30 minutes until their skins turn black.
- White Whole Wheat Flour or Whole Wheat Pastry Flour: For a healthier profile without sacrificing texture, these flours are excellent choices. White whole wheat flour offers the nutritional benefits of whole grains with a lighter texture and milder flavor than traditional whole wheat flour. Whole wheat pastry flour is even finer, yielding a tenderer muffin. Alternatively, a half-and-half combination of unbleached all-purpose flour and regular whole wheat flour can also work well, providing a balance of tenderness and fiber.
- Sweetener: You have flexibility here! You can use all granulated sugar, or for a carb-conscious option, a sugar alternative like stevia or erythritol. I often use a combination of both to achieve a perfectly balanced sweetness while keeping the sugar content lower. Adjust to your personal preference, remembering that very ripe bananas will contribute a good deal of natural sweetness.
- Non-fat Greek Yogurt: This ingredient is crucial for adding moisture, a tender crumb, and a significant protein boost without adding excessive fat. Its thick consistency works wonders in muffin batter, preventing them from becoming too dry or overly wet. Avoid using whole milk yogurt, as its higher fat content might make the muffins too dense or soggy.
- Eggs: Large eggs act as a binder, helping to structure the muffins and provide lift alongside our leavening agents. Ensure they are at room temperature for better incorporation into the batter.
- Baking Powder & Baking Soda: These are your leavening agents, responsible for the beautiful rise and fluffy texture of your muffins. Make sure they are fresh for optimal results.
- Salt: A pinch of salt is essential to balance the sweetness and enhance all the flavors in the muffin.
- Ground Cinnamon: This warm spice beautifully complements the banana flavor, adding depth and a comforting aroma.
- Chocolate Chips or Walnuts: For a delightful addition, mini chocolate chips are fantastic because they distribute evenly throughout the muffins, ensuring a burst of chocolate in every bite. Consider using stevia-sweetened chocolate chips to further manage the carb count. If you prefer a nutty crunch, chopped walnuts are a classic pairing with banana and offer healthy fats. You can also experiment with other add-ins like pecans, shredded coconut, or dried cranberries.
Have extra mashed banana? Don’t let it go to waste! Use it to make delightful banana oatmeal raisin cookies!
For a comprehensive list of ingredients and precise measurements, please refer to the detailed recipe card below.
How to Bake the Best Greek Yogurt Banana Muffins
Creating these moist and flavorful banana muffins with Greek yogurt is a simple process. Follow these straightforward steps for a perfect batch every time:

Step 1: Mash the Bananas
In a small bowl, use a fork to mash your ripe bananas. Don’t aim for a completely smooth puree; leaving a few small chunks of banana will create delightful bursts of flavor and texture throughout your finished muffins. Measure the required amount and set aside any excess for other recipes like smoothies or a quick banana bread. Preheat your oven to 350°F (175°C) and prepare your muffin tin by lining it with cupcake liners and lightly coating them with cooking spray.

Step 2: Combine Wet and Dry Ingredients
In a large mixing bowl, whisk together all your dry ingredients: flour, sweetener, salt, cinnamon, baking powder, and baking soda. In a separate, medium-sized bowl, whisk the egg and Greek yogurt until well combined and smooth. This ensures an even distribution of the wet components before they meet the dry ones.

Step 3: Gently Mix the Batter
Pour the whisked egg and Greek yogurt mixture into the dry ingredients. Then, add the mashed bananas to the bowl. Using a spatula, gently fold the ingredients together until just combined. The key here is not to over-mix! Over-mixing develops gluten in the flour, which can lead to tough, dry muffins. A few lumps in the batter are perfectly fine and even desirable.

Step 4: Fold in Your Add-ins
Now it’s time to add your chosen extras! Gently fold in the chocolate chips, chopped walnuts, or any other desired mix-ins using your spatula. Ensure they are evenly distributed throughout the batter with minimal stirring to avoid over-mixing.

Step 5: Fill Muffin Tins
Line a 12-cup muffin tin with paper liners. For extra non-stick insurance and easier removal, you can lightly spritz the inside of each liner with cooking spray. Divide the muffin batter evenly among the prepared wells, filling each about two-thirds full. This allows enough room for them to rise beautifully without overflowing.

Step 6: Bake and Cool
Bake the muffins in your preheated oven for 20-25 minutes, or until they are firm to the touch and lightly golden brown on top. A wooden skewer or toothpick inserted into the center of a muffin should come out clean when they are ready. Once baked, allow the muffins to cool in the pan for about 5 minutes before carefully transferring them to a wire rack to cool completely. This prevents them from becoming soggy from trapped steam. Don’t worry if the tops flatten a bit as they cool – they will still taste absolutely fantastic!
Expert Tips for the Best Muffins
- Don’t Over-mix: This is the golden rule for tender muffins. Mix until just combined; a few lumps are fine! Over-mixing develops gluten, leading to a tough, chewy texture.
- Use Room Temperature Ingredients: Eggs and Greek yogurt at room temperature mix more evenly into the batter, resulting in a smoother consistency and a better rise.
- Grease Generously: Even if using paper liners, a light spray of non-stick cooking spray inside each liner and the muffin tin wells will prevent sticking, especially with sticky additions like chocolate chips.
- Test for Doneness: Insert a toothpick into the center of a muffin. If it comes out clean or with a few moist crumbs, your muffins are ready.
- Cool Properly: Allow the muffins to cool in the pan for about 5 minutes, then transfer them to a wire rack. Cooling on a rack prevents the bottoms from becoming soggy due to trapped steam.
- Accurate Measurements: For baking, precision matters. Use proper measuring cups for dry ingredients (leveling off with a straight edge) and liquid measuring cups for wet ingredients.
- Embrace Overripe Bananas: The browner, the better! Their natural sweetness and moisture are key to this recipe’s success.

Delicious Breakfast Pairings
These healthy Greek yogurt banana muffins are wonderfully versatile and make a fantastic start to your day or a satisfying snack. Here are some ideas for how to enjoy them:
- With Protein: Pair a muffin with a serving of vanilla chia seed pudding with Greek yogurt for an extra boost of protein and healthy fats. You can prepare both ahead of time for a quick, wholesome breakfast all week long.
- Alongside Coffee or Tea: A warm muffin and your favorite hot beverage make for a simple yet comforting breakfast.
- With Fresh Fruit: Complement the banana flavor with a side of mixed berries, sliced apples, or a fruit salad.
- As Part of a Brunch Spread: These muffins are a welcome addition to any brunch, alongside eggs, bacon, and other favorites.
- On the Go: Their portable nature makes them perfect for busy mornings or as a quick pick-me-up during the day.

Storage and Freezing Instructions
Proper storage ensures your healthy Greek yogurt banana muffins remain fresh and delicious for as long as possible. They are perfect for meal prepping!
- Countertop (Short-term Storage): For muffins you plan to enjoy within 3-4 days, store them in an airtight container at room temperature. To prevent sogginess and absorb any excess moisture, line the bottom of the container with a paper towel. Arrange the muffins in a single layer if possible, and place another paper towel on top before sealing the lid. This simple trick helps maintain their texture and prevents them from becoming sticky or overly damp.
- Freezer (Long-term Storage): These muffins freeze beautifully! Once they have cooled completely to room temperature, individually wrap each muffin tightly in plastic wrap. Then, place the wrapped muffins in an airtight plastic freezer bag or a freezer-safe container. Stored properly, they will maintain their quality for up to 2 months. To enjoy, simply thaw them at room temperature for an hour or two, or gently warm them in the microwave for 20-30 seconds.
Explore More Healthy Yogurt Muffin Recipes
If you love the wholesome goodness of these Greek yogurt banana muffins, you’ll be thrilled to discover other delicious variations. The versatility of Greek yogurt in baking makes it a fantastic ingredient for creating moist, flavorful, and healthy muffins with various fruits and vegetables. Here are some more recipes to inspire your baking adventures:
- Healthy Chocolate Pumpkin Muffins
- Healthy Zucchini Blueberry Muffins with Greek Yogurt
- Healthy Pineapple Carrot Muffins Recipe
- Butternut Squash Muffins with Apples and Cinnamon
Would you like more easy, healthy, carb-conscious recipes?
Frequently Asked Questions (FAQs)
Can I use frozen bananas?
Yes, absolutely! Frozen overripe bananas work wonderfully. Thaw them completely first, then mash them as usual. You might notice more liquid from thawed bananas; simply drain any excess liquid before adding them to the batter.
What if I don’t have Greek yogurt?
While Greek yogurt is highly recommended for its texture and protein content, you can substitute it with regular plain yogurt. However, regular yogurt is thinner, so you might need to reduce the amount slightly (start with ¼ cup and add more if the batter seems too dry) or strain it for a bit to remove excess whey. Sour cream or buttermilk can also work as substitutes, but the flavor and nutritional profile will differ.
Can I make these gluten-free?
To make these muffins gluten-free, you can substitute the whole wheat flour with a 1:1 gluten-free baking flour blend. Ensure the blend contains xanthan gum for proper structure, or add ¼ teaspoon per cup of flour if it doesn’t.
How can I make these muffins more kid-friendly?
These muffins are already quite kid-friendly, especially with chocolate chips! You can also try adding sprinkles to the tops before baking, or finely grating some zucchini or carrots into the batter for an extra veggie boost they won’t even notice.
Can I omit the chocolate chips or replace them with something else?
Yes, you can certainly omit the chocolate chips for a simpler banana muffin. For other delicious variations, consider adding chopped nuts (walnuts or pecans), shredded coconut, dried cranberries, raisins, or even a mix of spices like nutmeg or ginger for a different flavor profile.
My muffins came out dry/tough, what went wrong?
The most common culprit for dry or tough muffins is over-mixing the batter. Mix just until the dry and wet ingredients are combined – a few lumps are perfectly fine. Another reason could be over-baking; keep an eye on them and remove them from the oven as soon as a toothpick comes out clean.
📋 Recipe: Healthy Greek Yogurt Banana Muffins

Healthy Greek Yogurt Banana Muffins
Print
Pin
Rate
10 minutes
25 minutes
35 minutes
12
servings
Marjory Pilley
Ingredients
-
2
cups
mashed bananas
(about two very ripe bananas) -
2
eggs
(beaten) -
½
cup
non-fat Greek yogurt -
1 ½
cups
white whole wheat flour
(or whole wheat pastry flour) -
⅓
cup
Stevia Blend
(or ⅓ cup granulated sugar) -
½
teaspoon
salt -
½
teaspoon
ground cinnamon -
½
teaspoon
baking powder -
½
teaspoon
baking soda -
½
cup
chocolate chips
(stevia sweetened or chopped walnuts)
Instructions
- Preheat oven to 350°F (175°C). Prepare a 12-cup muffin tin by lining it with paper liners and lightly spritzing with cooking spray for easy removal.
- In a small bowl, mash the ripe bananas with a fork, leaving some small chunks for texture. Measure out 2 cups and set aside.
- In a large bowl, combine the flour, sweetener, baking powder, baking soda, salt, and cinnamon. Whisk well to ensure all dry ingredients are evenly distributed.
- In a separate medium bowl, whisk the eggs and non-fat Greek yogurt together until smooth.
- Pour the wet egg and yogurt mixture into the large bowl with the dry ingredients. Add the mashed bananas. Using a spatula, gently fold the ingredients together just until combined. Be careful not to over-mix; a few lumps are normal.
- Gently fold in the chocolate chips or chopped walnuts until evenly distributed.
- Divide the muffin batter evenly among the prepared muffin cups, filling each about two-thirds full.
- Bake for 20-25 minutes, or until the muffins are firm to the touch, lightly browned on top, and a wooden skewer inserted into the center comes out clean.
- Allow the muffins to cool in the muffin tin for 5 minutes before carefully transferring them to a wire rack to cool completely. Enjoy warm or at room temperature!
Notes
Storage:
- Countertop: Store Greek yogurt banana muffins you will use in the next 3-4 days in an airtight container on the countertop at room temperature. Line the container with a paper towel and arrange the muffins in a single layer for best results. Place another paper towel on top. The paper towel will absorb excess moisture as the muffins settle, preventing sogginess.
- Freezer: Cool the muffins completely, then individually wrap each in plastic wrap. Store them in an airtight plastic bag or container for up to 2 months.
Top Tips:
- Generously coat the muffin tin wells and paper liners with non-stick cooking spray for easy removal.
- Allow the muffins to cool in the pan for around 5 minutes before transferring them to a cooling rack. Leaving them in the pan for too long can cause them to become soggy from trapped steam.
- Do not over-mix the batter; mix until just combined for tender muffins.
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Nutrition
Calories:
156
kcal
|
Carbohydrates:
35
g
|
Protein:
4
g
|
Fat:
3
g
|
Saturated Fat:
2
g
|
Polyunsaturated Fat:
0.2
g
|
Monounsaturated Fat:
0.3
g
|
Trans Fat:
0.003
g
|
Cholesterol:
28
mg
|
Sodium:
156
mg
|
Potassium:
190
mg
|
Fiber:
3
g
|
Sugar:
10
g
|
Vitamin A:
64
IU
|
Vitamin C:
3
mg
|
Calcium:
33
mg
|
Iron:
1
mg
Nutritional and Food Safety Disclaimer
